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<a href="#pub-attribs">Data Fields</a>  </div>
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<div class="title">bigWigFile_t Struct Reference</div>  </div>
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<p>A structure that holds everything needed to access a bigWig file.  
 <a href="structbigWigFile__t.html#details">More...</a></p>

<p><code>#include &lt;<a class="el" href="bigWig_8h_source.html">bigWig.h</a>&gt;</code></p>
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Data Fields</h2></td></tr>
<tr class="memitem:abaccab4cf24d79952cdf593baab2c9fb"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structURL__t.html">URL_t</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structbigWigFile__t.html#abaccab4cf24d79952cdf593baab2c9fb">URL</a></td></tr>
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<tr class="memitem:adfda8de595196dcd66d9594cbd0b30d8"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structbigWigHdr__t.html">bigWigHdr_t</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structbigWigFile__t.html#adfda8de595196dcd66d9594cbd0b30d8">hdr</a></td></tr>
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<tr class="memitem:ac1afdee9f31c8e69dc2a902ee0605f78"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structchromList__t.html">chromList_t</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structbigWigFile__t.html#ac1afdee9f31c8e69dc2a902ee0605f78">cl</a></td></tr>
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<tr class="memitem:a448fd3c9fc0cf6f3a0ffa98b1a6d3199"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structbwRTree__t.html">bwRTree_t</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structbigWigFile__t.html#a448fd3c9fc0cf6f3a0ffa98b1a6d3199">idx</a></td></tr>
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<tr class="memitem:abd73667391749fbfd49c96105f643133"><td class="memItemLeft" align="right" valign="top"><a class="el" href="structbwWriteBuffer__t.html">bwWriteBuffer_t</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structbigWigFile__t.html#abd73667391749fbfd49c96105f643133">writeBuffer</a></td></tr>
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<tr class="memitem:a76e415b9a2933c94927c4e137057bd4a"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structbigWigFile__t.html#a76e415b9a2933c94927c4e137057bd4a">isWrite</a></td></tr>
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<tr class="memitem:a8b025cec8945b0ad1aef06113f17c463"><td class="memItemLeft" align="right" valign="top">int&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structbigWigFile__t.html#a8b025cec8945b0ad1aef06113f17c463">type</a></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>A structure that holds everything needed to access a bigWig file. </p>
</div><h2 class="groupheader">Field Documentation</h2>
<a id="ac1afdee9f31c8e69dc2a902ee0605f78"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ac1afdee9f31c8e69dc2a902ee0605f78">&#9670;&nbsp;</a></span>cl</h2>

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          <td class="memname"><a class="el" href="structchromList__t.html">chromList_t</a>* bigWigFile_t::cl</td>
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<p>A list of chromosome names (the order is the ID). </p>

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<h2 class="memtitle"><span class="permalink"><a href="#adfda8de595196dcd66d9594cbd0b30d8">&#9670;&nbsp;</a></span>hdr</h2>

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          <td class="memname"><a class="el" href="structbigWigHdr__t.html">bigWigHdr_t</a>* bigWigFile_t::hdr</td>
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<p>The file header. </p>

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<a id="a448fd3c9fc0cf6f3a0ffa98b1a6d3199"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a448fd3c9fc0cf6f3a0ffa98b1a6d3199">&#9670;&nbsp;</a></span>idx</h2>

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          <td class="memname"><a class="el" href="structbwRTree__t.html">bwRTree_t</a>* bigWigFile_t::idx</td>
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<p>The index for the full dataset. </p>

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<a id="a76e415b9a2933c94927c4e137057bd4a"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a76e415b9a2933c94927c4e137057bd4a">&#9670;&nbsp;</a></span>isWrite</h2>

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          <td class="memname">int bigWigFile_t::isWrite</td>
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<p>0: Opened for reading, 1: Opened for writing. </p>

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<a id="a8b025cec8945b0ad1aef06113f17c463"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a8b025cec8945b0ad1aef06113f17c463">&#9670;&nbsp;</a></span>type</h2>

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          <td class="memname">int bigWigFile_t::type</td>
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<p>0: bigWig, 1: bigBed. </p>

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<h2 class="memtitle"><span class="permalink"><a href="#abaccab4cf24d79952cdf593baab2c9fb">&#9670;&nbsp;</a></span>URL</h2>

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          <td class="memname"><a class="el" href="structURL__t.html">URL_t</a>* bigWigFile_t::URL</td>
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<p>A pointer that can handle both local and remote files (including a buffer if needed). </p>

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<a id="abd73667391749fbfd49c96105f643133"></a>
<h2 class="memtitle"><span class="permalink"><a href="#abd73667391749fbfd49c96105f643133">&#9670;&nbsp;</a></span>writeBuffer</h2>

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          <td class="memname"><a class="el" href="structbwWriteBuffer__t.html">bwWriteBuffer_t</a>* bigWigFile_t::writeBuffer</td>
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<p>The buffer used for writing. </p>

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<hr/>The documentation for this struct was generated from the following file:<ul>
<li><a class="el" href="bigWig_8h_source.html">bigWig.h</a></li>
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